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As a part of the Scientific Committee on Oceanographic Research (SCOR) Working Group #160 “Analyzing ocean turbulence observations to quantify mixing” (ATOMIX), we have developed recommendations on best practices for estimating the rate of dissipation of kinetic energy,ε, from measurements of turbulence shear using shear probes. The recommendations provided here are platform-independent and cover the conceivable range of dissipation rates in the ocean, seas, and other natural waters. They are applicable to commonly deployed platforms that include vertical profilers, fixed and moored instruments, towed profilers, submarines, self-propelled ocean gliders, and other autonomous underwater vehicles. The procedure for preparing the shear data for spectral estimation is discussed in detail, as are the quality control metrics that should accompany each estimate ofε. The methods are illustrated using a high-quality ‘benchmark’ dataset, while potential pitfalls are demonstrated with a second dataset containing common faults. 

Abstract Generating mechanisms and parameterizations for enhanced turbulence in the wake of a seamount in the path of the Kuroshio are investigated. Full-depth profiles of finescale temperature, salinity, horizontal velocity, and microscale thermal-variance dissipation rate up- and downstream of the ∼10-km-wide seamount were measured with EM-APEX profiling floats and ADCP moorings. Energetic turbulent kinetic energy dissipation ratesand diapycnal diffusivitiesabove the seamount flanks extend at least 20 km downstream. This extended turbulent wake length is inconsistent with isotropic turbulence, which is expected to decay in less than 100 m based on turbulence decay time ofN⁻¹∼ 100 s and the 0.5 m s⁻¹Kuroshio flow speed. Thus, the turbulent wake must be maintained by continuous replenishment which might arise from (i) nonlinear instability of a marginally unstable vortex wake, (ii) anisotropic stratified turbulence with expected downstream decay scales of 10–100 km, and/or (iii) lee-wave critical-layer trapping at the base of the Kuroshio. Three turbulence parameterizations operating on different scales, (i) finescale, (ii) large-eddy, and (iii) reduced-shear, are tested. Averageεvertical profiles are well reproduced by all three parameterizations. Vertical wavenumber spectra for shear and strain are saturated over 10–100 m vertical wavelengths comparable to water depth with spectral levels independent ofεand spectral slopes of −1, indicating that the wake flows are strongly nonlinear. In contrast, vertical divergence spectral levels increase withε.